bio 的反向依賴 下列 Gems 的最新版本需要 bio
rbbt-sources 3.4.2
Data sources like PubMed, Entrez Gene, or Gene Ontology
247,609 下載
mspire 0.10.8.0
mass spectrometry proteomics, lipidomics, and tools, a rewrite of mspire, merging of ms...
236,503 下載
snp-search 2.12.0
Use the snp-search tool to create, import, manipulate and query your SNP database
134,219 下載
bio-samtools 2.6.2
Binder of samtools for ruby, on the top of FFI. This project was born from the need...
129,017 下載
bio-polyploid-tools 1.2.1
Repository of tools developed at Crop Genetics in JIC to work with polyploid wheat
125,524 下載
bacterial-annotator 1.0.1
GEM to annotate bacterial genome sequence based on a reference genome and complete the ...
111,000 下載
protk 1.4.4
Commandline tools for proteomics
103,063 下載
parse_fasta 2.5.2
Provides nice, programmatic access to fasta and fastq files, as well as providing Seque...
91,406 下載
bio-gadget 0.5.0
Gadgets for bioinformatics
87,114 下載
iroki 0.0.36
Command line app and library code for Iroki, a phylogenetic tree customization program.
84,700 下載
transrate 1.0.1
a library and command-line tool for quality assessment of de-novo transcriptome assemblies
82,862 下載
bio-ucsc-api 0.6.5
Ruby UCSC API: accessing the UCSC Genome Database using Ruby
79,564 下載
bio-svgenes 0.4.1
This bio-gem facilitates the creation of pretty, publication quality SVG images from fe...
63,792 下載
ms-core 0.0.19
basic, shared functionality for mspire libraries.
58,909 下載
biointerchange 1.0.8
BioInterchange is a Ruby gem, command-line tool, web-service for turning heterogeneous ...
50,339 下載
crb-blast 0.6.9
See summary
50,236 下載
wrnap 1.2.2
A comprehensive wrapper w(RNA)pper for various RNA CLI programs.
48,548 下載
bio-gff3 0.9.1
GFF3 (genome browser) information and digest mRNA and CDS sequences. Options for low me...
47,549 下載
full_lengther_next 1.0.6
FULL-LENGTHERNEXT is a tool adapted to NGS technologies, able to work in parallel and i...
44,997 下載
bio-basespace-sdk 0.1.7
BaseSpace Ruby SDK is a Ruby based Software Development Kit to be used in the developme...
43,782 下載
bio-band 0.1.11
Data mining and machine learning algorithms for JRuby
41,025 下載
genevalidatorapp 2.1.8
A Web App wrapper for GeneValidator, a program for validating gene predictions.
40,878 下載
rbfam 12.0.1.1
Light wrapper for RFam data in Ruby.
40,471 下載
genevalidator 2.1.5
The tool validates the input predicted genes and provides useful information (length va...
39,914 下載
fasta_util 0.5.2
Easy fasta filtering, wrapping, calculating common statistics, sorting etc. Based on th...
38,947 下載
bio-publisci 0.1.0
A toolkit for publishing scientific results and datasets using RDF, OWL, and related te...
34,391 下載
ulla 0.9.9.2
'ulla' is a program for calculating environment-specific substitution tables from user ...
33,383 下載
bio-ngs 0.5.2
bio-ngs provides a framework for handling NGS data with BioRuby
32,311 下載
bio-ngs 0.5.2
bio-ngs provides a framework for handling NGS data with BioRuby
32,311 下載
bio-faster 0.4.5
A fast parser for FastQ files
31,874 下載